{"id":1699,"date":"2019-12-21T16:27:35","date_gmt":"2019-12-21T16:27:35","guid":{"rendered":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/?page_id=1699"},"modified":"2020-05-29T01:55:18","modified_gmt":"2020-05-29T01:55:18","slug":"web-services","status":"publish","type":"page","link":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/?page_id=1699","title":{"rendered":"Web Services"},"content":{"rendered":"<h2><\/h2>\n<table border=\"0\" width=\"100%\" cellspacing=\"0\" cellpadding=\"0\">\n<tbody>\n<tr>\n<td style=\"text-align: right;\" align=\"right\" width=\"25%\"><a href=\"http:\/\/causalmgm.org\" target=\"_blank\" rel=\"noopener\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-1147\" src=\"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/CausalMGM-300x194.jpg\" alt=\"\" width=\"151\" height=\"97\" srcset=\"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/CausalMGM-300x194.jpg 300w, https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/CausalMGM-768x496.jpg 768w, https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/CausalMGM-1024x662.jpg 1024w, https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/CausalMGM-232x150.jpg 232w, https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/CausalMGM-150x97.jpg 150w\" sizes=\"auto, (max-width: 151px) 100vw, 151px\" \/><\/a><\/td>\n<td class=\"text\" width=\"75%\"><em>Directed graphs over mixed data \u00a0types \u00a0<\/em><\/td>\n<\/tr>\n<tr>\n<td style=\"text-align: right;\" align=\"right\" width=\"25%\"><a href=\"http:\/\/www.benoslab.pitt.edu\/comir\/\" target=\"_blank\" rel=\"noopener\"><img loading=\"lazy\" decoding=\"async\" class=\" wp-image-127 alignright\" src=\"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/ComiR_logo_small.jpg\" alt=\"ComiR_logo_small\" width=\"107\" height=\"101\" srcset=\"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/ComiR_logo_small.jpg 210w, https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/ComiR_logo_small-158x150.jpg 158w, https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/ComiR_logo_small-150x143.jpg 150w\" sizes=\"auto, (max-width: 107px) 100vw, 107px\" \/><\/a><\/td>\n<td class=\"text\" width=\"75%\"><em>Combinatorial microRNA target prediction \u00a0<\/em><\/td>\n<\/tr>\n<tr>\n<td style=\"text-align: right;\" align=\"right\" width=\"25%\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-128\" src=\"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/miRconnX_logo.png\" alt=\"miRconnX_logo\" width=\"159\" height=\"60\" srcset=\"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/miRconnX_logo.png 212w, https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/miRconnX_logo-150x57.png 150w\" sizes=\"auto, (max-width: 159px) 100vw, 159px\" \/><\/td>\n<td class=\"text\" width=\"75%\"><em>Condition-specific mRNA-microRNA regulatory networks<\/em><\/td>\n<\/tr>\n<tr>\n<td style=\"text-align: right;\" align=\"right\" width=\"25%\"><a href=\"http:\/\/www.benoslab.pitt.edu\/stamp\/\" target=\"_blank\" rel=\"noopener\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-130\" src=\"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/stamp_logo_small.jpg\" alt=\"stamp_logo_small\" width=\"131\" height=\"97\" srcset=\"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/stamp_logo_small.jpg 277w, https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/stamp_logo_small-203x150.jpg 203w, https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/stamp_logo_small-150x111.jpg 150w\" sizes=\"auto, (max-width: 131px) 100vw, 131px\" \/><\/a><\/td>\n<td class=\"text\" width=\"75%\"><em>Alignment, Similarity, &amp; Database Matching for DNA Motifs<\/em><\/td>\n<\/tr>\n<tr>\n<td style=\"text-align: right;\" align=\"right\" width=\"25%\"><a href=\"http:\/\/www.benoslab.pitt.edu\/astro\/index.php\" target=\"_blank\" rel=\"noopener\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-full wp-image-131\" src=\"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/ASTRO_sm.gif\" alt=\"ASTRO_sm\" width=\"150\" height=\"82\" \/><\/a><\/td>\n<td width=\"75%\"><em class=\"text\">Analysis of Short Time-series using Rank Order preservation<\/em><\/td>\n<\/tr>\n<tr>\n<td style=\"text-align: right;\" align=\"right\" width=\"25%\"><a href=\"http:\/\/www.benoslab.pitt.edu\/cgi-bin\/enologos\/enologos.cgi\" target=\"_blank\" rel=\"noopener\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-full wp-image-132\" src=\"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/enologos03asm.jpg\" alt=\"enologos03asm\" width=\"150\" height=\"34\" \/><\/a><\/td>\n<td width=\"75%\"><em class=\"text\">energy normalized LOGOs<\/em><\/td>\n<\/tr>\n<tr>\n<td style=\"text-align: right;\" align=\"right\" width=\"25%\"><a href=\"http:\/\/www.benoslab.pitt.edu\/cgi-bin\/enologos\/enologos.cgi?page=C2H2_input\" target=\"_blank\" rel=\"noopener\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-full wp-image-133\" src=\"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/enologosC2H2a.smjpg_.jpg\" alt=\"enologosC2H2a.smjpg\" width=\"150\" height=\"35\" \/><\/a><\/td>\n<td width=\"75%\"><em class=\"text\">energy normalized LOGOs of the C2H2 protein family<\/em><\/td>\n<\/tr>\n<tr>\n<td style=\"text-align: right;\" width=\"25%\"><a href=\"http:\/\/www.benoslab.pitt.edu\/footer_php\/Footerv2_0.php\" target=\"_blank\" rel=\"noopener\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-full wp-image-134\" src=\"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/wp-content\/uploads\/2015\/01\/footersm.jpg\" alt=\"footersm\" width=\"150\" height=\"141\" \/><\/a><\/td>\n<td class=\"text\" width=\"75%\"><em>finding mammalian transcription factor binding sites using phylogentic footprinting<\/em><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p>&nbsp; <\/p>\n","protected":false},"excerpt":{"rendered":"<p>Directed graphs over mixed data \u00a0types \u00a0 Combinatorial microRNA target prediction \u00a0 Condition-specific mRNA-microRNA regulatory networks Alignment, Similarity, &amp; Database Matching for DNA Motifs Analysis of Short Time-series using Rank Order preservation energy normalized LOGOs energy normalized LOGOs of the C2H2 protein family finding mammalian transcription factor binding sites using &#8230;<\/p>\n<p> <a class=\"continue-reading-link\" href=\"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/?page_id=1699\"><span>Continue reading<\/span><i class=\"crycon-right-dir\"><\/i><\/a> <\/p>\n","protected":false},"author":3,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-1699","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/index.php?rest_route=\/wp\/v2\/pages\/1699","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/index.php?rest_route=\/wp\/v2\/users\/3"}],"replies":[{"embeddable":true,"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=1699"}],"version-history":[{"count":3,"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/index.php?rest_route=\/wp\/v2\/pages\/1699\/revisions"}],"predecessor-version":[{"id":1853,"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/index.php?rest_route=\/wp\/v2\/pages\/1699\/revisions\/1853"}],"wp:attachment":[{"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=1699"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}