{"id":1704,"date":"2019-12-21T16:30:46","date_gmt":"2019-12-21T16:30:46","guid":{"rendered":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/?page_id=1704"},"modified":"2019-12-25T12:49:40","modified_gmt":"2019-12-25T12:49:40","slug":"software-downloads","status":"publish","type":"page","link":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/?page_id=1704","title":{"rendered":"Software Downloads"},"content":{"rendered":"\n<\/p>\n\n\n\n\n\n
\"\"<\/a><\/td>\nssNPA<\/a>\u00a0version 1.0<\/em><\/a> (December 2019) Directory
\nReference: Buschur, Chikina, Benos,\u00a0Bioinformatics<\/em> (2019), to appear. \u00a0PMID:31873725<\/a>.<\/td>\n<\/tr>\n

<\/p>\n

\"\"<\/a><\/td>\nMGM-FCI-MAX\u00a0version 1.0<\/em><\/a> (May 2019) ZIP archive
\nReference:\u00a0Raghu, Poon, Benos,\u00a0Proc Machine Learning Research<\/em>\u00a0(2018)\u00a092:<\/strong>48-65. \u00a0(PDF<\/a>)<\/td>\n<\/tr>\n

<\/p>\n

\"\"<\/a><\/td>\npiMGM\u00a0version 1.0<\/em><\/a> (October 2018) ZIP archive
\nReference: Manatakis, Raghu, Benos,\u00a0Bioinformatics<\/em> (2018)\u00a034:<\/strong>i848\u2013i856. \u00a0PMID:30423087<\/a>.<\/td>\n<\/tr>\n

<\/p>\n

\u00a0\"\"<\/a><\/td>\nHHMMiR version v1.2<\/em><\/a> (April 2009) ZIP archive
\nReference: Kadri, Hinman, Benos,\u00a0BMC Bioinformatics<\/em>\u00a0(2009) 10(Supl 1):<\/strong>S35. \u00a0PMID:19208136<\/a>.<\/td>\n<\/tr>\n

<\/p>\n

\"stamp_logo_small\"<\/a><\/td>\nSTAMP version 1.1<\/em><\/a> (March 2008) ZIP archive
\nReference: Mahony, Benos, Nucleic Acids Research\u00a0<\/em>(2007)\u00a035:<\/strong>W253-258. \u00a0PMID: 17478497<\/a>.<\/td>\n<\/tr>\n

<\/tbody>\n<\/table>\n","protected":false},"excerpt":{"rendered":"

ssNPA\u00a0version 1.0 (December 2019) Directory Reference: Buschur, Chikina, Benos,\u00a0Bioinformatics (2019), to appear. \u00a0PMID:31873725. MGM-FCI-MAX\u00a0version 1.0 (May 2019) ZIP archive Reference:\u00a0Raghu, Poon, Benos,\u00a0Proc Machine Learning Research\u00a0(2018)\u00a092:48-65. \u00a0(PDF) piMGM\u00a0version 1.0 (October 2018) ZIP archive Reference: Manatakis, Raghu, Benos,\u00a0Bioinformatics (2018)\u00a034:i848\u2013i856. \u00a0PMID:30423087. \u00a0 HHMMiR version v1.2 (April 2009) ZIP archive Reference: Kadri, Hinman, Benos,\u00a0BMC …<\/p>\n

Continue reading<\/span><\/i><\/a> <\/p>\n","protected":false},"author":3,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-1704","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/index.php?rest_route=\/wp\/v2\/pages\/1704","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/index.php?rest_route=\/wp\/v2\/users\/3"}],"replies":[{"embeddable":true,"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=1704"}],"version-history":[{"count":6,"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/index.php?rest_route=\/wp\/v2\/pages\/1704\/revisions"}],"predecessor-version":[{"id":1726,"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/index.php?rest_route=\/wp\/v2\/pages\/1704\/revisions\/1726"}],"wp:attachment":[{"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/benos\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=1704"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}