GraphVelo:<\/a> python package for inferring velocities from multi-modal single cell data needed for subsequent Dynamo analyses. CHECK MORE on Xing lab github site<\/a><\/p>\n\n\n\n Jianhua’s 2025 APS March Meeting talk (chromosome folding<\/a>) Softwares GraphVelo: python package for inferring velocities from multi-modal single cell data needed for subsequent Dynamo analyses.Dynamo: python package for reconstructing transcriptomic vector field from single cell RNA-seq data (referring Qiu et al. Cell)mosaic-picasso: python package for accurate crosstalk removal for multiplex fluorescence imagingLiveCellX: python package for live-cell imaging analyses, which replaces M-Track.M-Track: Python package […]<\/p>\n","protected":false},"author":3,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-437","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/xing\/index.php?rest_route=\/wp\/v2\/pages\/437","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/xing\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/xing\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/xing\/index.php?rest_route=\/wp\/v2\/users\/3"}],"replies":[{"embeddable":true,"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/xing\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=437"}],"version-history":[{"count":13,"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/xing\/index.php?rest_route=\/wp\/v2\/pages\/437\/revisions"}],"predecessor-version":[{"id":782,"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/xing\/index.php?rest_route=\/wp\/v2\/pages\/437\/revisions\/782"}],"wp:attachment":[{"href":"https:\/\/csbweb.csb.pitt.edu\/Faculty\/xing\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=437"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}
Dynamo: <\/a>python package for reconstructing transcriptomic vector field from single cell RNA-seq data (referring Qiu et al. Cell)
mosaic-picasso: <\/a>python package for accurate crosstalk removal for multiplex fluorescence imaging
LiveCellX:<\/a> python package for live-cell imaging analyses, which replaces M-Track.
M-Track: <\/a>Python package for live cell imaging analyses (see Wang et al. Sci Adv)<\/a>
Xing lab addgene site: <\/a>Plasmids for CRISPR knockin (see Chen et. al. Biol. Methods Protoc<\/a>)<\/p>\n\n\n\nTalks<\/h2>\n\n\n\n
Jianhua’s 2024 TEMTIA XI talk<\/a>
Jianhua’s 2023 BIRS talk<\/a>
Jianhua’s 2022 Harvard Theory Lunch talk<\/a>
CQB center\/PKU 2022 workshop <\/a>
Jianhua’s 2022 ClubNanothermodynamica talk (in Chinese)<\/a>
Jianhua’s 2021 bppb seminar<\/a>
Jianhua’s 2021 BIRS talk<\/a>
Weikang’s 2021 SLAAM seminar<\/a>
Jianhua’s 2020 Harvard Theory Lunch tal<\/a>k<\/p>\n","protected":false},"excerpt":{"rendered":"