Our dynamo ms published in Cell
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Yan’s dynamo ms submitted
https://www.biorxiv.org/content/10.1101/696724v2.full Single-cell RNA-seq, together with RNA velocity and metabolic labeling, reveals cellular states and transitions at unprecedented resolution. Fully exploiting these data, however, requires dynamical models capable of predicting cell fate and unveiling the governing regulatory mechanisms. Here, we introduce dynamo, an analytical framework that reconciles intrinsic splicing and labeling kinetics to estimate absolute RNA […]
Yan’s talks at various conferences are well-received
Yan Zhang talked at Human Cell Atlas Asia 2020 and the 13th RECOMB/ISCB conference.
Dr Xing gave a few seminar/conference talks
Dr Xing talked at Harvard Medical School Theory Lunch series, Rockefeller Center for Studies in Physics and Biology, and EMBL-EBI Industry workshop.
Weikang’s first live cell studies of EMT accepted in Sci Adv.
Weikang Wang, Diana L. Douglas, Jingyu Zhang, Sangeeta Kumari, Metewo Selase Enuameh, Yan Dai, Callen T. Wallace, Simon C. Watkins, Weiguo Shu, Jianhua Xing, Live cell imaging and analysis reveal cell phenotypic transition dynamics inherently missing in snapshot data, BioRxiv copy, Science Advances, accepted. We hope to catch up the lost time due to lockdown […]
Dr Xing will talk at the 19th International Workshop on Data Mining in Bioinformatics
The goal of the 19th International Workshop on Data Mining in Bioinformatics (BIOKDD’20) is to encourage KDD researchers to tackle the numerous challenges of mining and learning in Bioinformatics, Biomedical and Health Informatics. Dr Xing plans to talk about our research on single cell studies.
We received UPCI Pilot Award
We have been awarded a collaborative research award from the UPMC Hillman Developmental Pilot Program. The project title is “CRISPR-enabled tracking of cancer cell chromosome instability and karyotype landscape evolution”. The team includes Dr Xing (PI), Jian Yu (PI), Simon Watkins (Co-I), and Yijiun Chen (Co-I).
M-TRACK ms deposited to bioRxiv
https://www.biorxiv.org/content/10.1101/2019.12.12.874248v1
Weikang Wang received Postdoc of the Year 2019 Award
Congratulations! Let’s push the papers out.